Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs38033 chr5:96322136 A/G ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs38034 chr5:96322419 C/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs38035 chr5:96323280 C/T ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs38036 chr5:96323503 A/G ERAP2 chr5:96211643-96255420:+ 0.87 9.37 9.25E-13 Box Plot
ACC rs3803716 chr16:24802325 C/T SLC5A11 chr16:24857162-24922949:+ 1.05 5.48 1.24E-6 Box Plot
ACC rs3803771 chr17:80687758 G/A FN3KRP chr17:80674559-80688204:+ 0.7 6.11 1.3E-7 Box Plot
ACC rs380397 chr20:44456655 G/T WFDC3 chr20:44376583-44420571:- 0.68 5.05 5.78E-6 Box Plot
ACC rs380421 chr20:44378577 T/C WFDC3 chr20:44376583-44420571:- 0.9 6.65 1.81E-8 Box Plot
ACC rs380973 chr20:44455176 A/G WFDC3 chr20:44376583-44420571:- 0.75 5.56 9.34E-7 Box Plot
ACC rs3816952 chr1:213093510 G/A LQK1 chr1:213029947-213031480:- 0.64 5.21 3.24E-6 Box Plot
ACC rs3816957 chr1:213094051 T/C LQK1 chr1:213029947-213031480:- 0.64 5.21 3.24E-6 Box Plot
ACC rs3818554 chr6:42934620 C/T PEX6 chr6:42931608-42946958:- 0.66 5.29 2.47E-6 Box Plot
ACC rs3821222 chr2:61713526 C/G C2orf74 chr2:61372203-61391964:+ 0.65 6.38 4.85E-8 Box Plot
ACC rs382515 chr20:44380316 A/C WFDC3 chr20:44376583-44420571:- 0.9 6.48 3.38E-8 Box Plot
ACC rs382558 chr20:44380269 A/G WFDC3 chr20:44376583-44420571:- 0.9 6.48 3.38E-8 Box Plot